publications

2025

1. Aquat. Geochem

   Statistical prediction of in situ coral reef carbonate dynamics using endmember chemistry, hydrodynamic models, and benthic composition

   HK Hirsh , TA Oliver , T Dobbelaere , AM Palacio-Castro , and 4 more authors

   Aquatic Geochemistry, 2025

   Bib HTML

   @article{hirsh_2025,
     title = {Statistical prediction of in situ coral reef carbonate dynamics using endmember chemistry, hydrodynamic models, and benthic composition},
     author = {Hirsh, HK and Oliver, TA and Dobbelaere, T and Palacio-Castro, AM and Barkley, HC and Webb, AE and Hanert, E and Enochs, IC},
     journal = {Aquatic Geochemistry},
     abbr = {Aquat. Geochem},
     volume = {31},
     number = {4},
     html = {https://link.springer.com/article/10.1007/s10498-025-09438-x},
     doi = {10.1007/s10498-025-09438-x},
     language = {en},
     urldate = {2025-02-26},
     year = {2025}
   }

2. 

   Genotypes of Acropora cervicornis in Florida show resistance to either elevated nutrients or disease, but not both in combination

   AM Palacio-Castro , D Kroesche , IC Enochs , C Kelble , and 3 more authors

   PLOS One, 2025

   Bib HTML Code

   @article{PalacioResistada2025,
     title = {Genotypes of <i>Acropora cervicornis</i> in Florida show resistance to either elevated nutrients or disease, but not both in combination},
     author = {Palacio-Castro, AM and Kroesche, D and Enochs, IC and Kelble, C and Smith, I and Baker, AC and SM, Rosales},
     journal = {PLOS One},
     volume = {31},
     number = {1},
     issn = {1380-6165},
     html = {https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0320378},
     doi = {10.1371/journal.pone.0320378},
     code = {https://github.com/anampc/Acer_NH4_disease},
     year = {2025},
   }

3. 

   Elevated temperature decreases stony coral tissue loss disease transmission, with little effect of nutrients

   AM Palacio-Castro , N Soderberg , Z Zagon , K Cooke , and 5 more authors

   Scientific Reports, 2025

   Bib HTML Code

   @article{PalacioCastro2025_SCTLD,
     title = {Elevated temperature decreases stony coral tissue loss disease transmission, with little effect of nutrients},
     author = {Palacio-Castro, AM and Soderberg, N and Zagon, Z and Cooke, K and Studivan, MS and Gill, T and Kelble, C and Christian, T and Enochs, IC},
     journal = {Scientific Reports},
     volume = {15},
     number = {1},
     issn = {1380-6165},
     html = {https://doi.org/10.1038/s41598-025-06322-0},
     doi = {10.1038/s41598-025-06322-0},
     code = {https://github.com/anampc/SCTLD_environment},
     year = {2025},
   }

2024

1. 

   Sequential Treatment Application Robot (STAR) for high-replication marine experimentation

   IC Enochs , N Soderberg , AM Palacio-Castro , and K Eaton

   HardwareX, 2024

   Bib HTML Code

   @article{enochs_sequential_2024,
     title = {Sequential {Treatment} {Application} {Robot} ({STAR}) for high-replication marine experimentation},
     author = {Enochs, IC and Soderberg, N and Palacio-Castro, AM and Eaton, K},
     volume = {18},
     journal = {HardwareX},
     issn = {24680672},
     html = {https://doi.org/10.1016/j.ohx.2024.e00524},
     code = {https://github.com/ienochs/STARSystem},
     doi = {10.1016/j.ohx.2024.e00524},
     year = {2024},
     pages = {e00524},
   }

2. 

   Rubble Persistence under Ocean Acidification threatened by accelerated bioerosion and lower-density coral skeletons

   AE Webb , AM Palacio-Castro , K Cooke , K Eaton , and 9 more authors

   Global Change Biology, 2024

   Bib HTML PDF

   @article{Webb2024stones,
     title = {Rubble Persistence under Ocean Acidification threatened by accelerated bioerosion and lower-density coral skeletons},
     author = {Webb, AE and Palacio-Castro, AM and Cooke, K and Eaton, K and Chomitz, B and Soderberg, N and Chakraborty, M and Zagon, Z and Boyd, A and Kiel, PM and DeMerlis, A and Perry, CT and Enochs, IC},
     journal = {Global Change Biology},
     volume = {30},
     number = {6},
     year = {2024},
     abbr = {GCB},
     html = {https://doi.org/10.1111/gcb.17371},
     pdf = {2024_Webb_GCB.pdf}
   }

3. 

   Sediment source and dose influence the larval performance of the threatened coral Orbicella faveolata

   XM Serrano , SM Rosales , MW Miller , AM Palacio-Castro , and 3 more authors

   PLOS One, 2024

   Bib HTML Code

   @article{serrano_sediments_2024,
     title = {Sediment source and dose influence the larval performance of the threatened coral <i>Orbicella faveolata</i>},
     author = {Serrano, XM and Rosales, SM and Miller, MW and Palacio-Castro, AM and Williamson, OM and Gomez, A and Baker, AC},
     journal = {PLOS One},
     volume = {19},
     number = {6},
     html = {https://doi.org/10.1371/journal.pone.0292474},
     code = {https://anampc.github.io/Sediments_Larvae/},
     year = {2024},
   }

2023

1. 

   Coral disease outbreak at the remote Flower Garden Banks, Gulf of Mexico

   MA Johnston , MS Studivan , IC Enochs , A Correa , and 7 more authors

   Frontiers in Marine Science, 2023

   Bib HTML

   @article{johnston2023coral,
     title = {Coral disease outbreak at the remote Flower Garden Banks, Gulf of Mexico},
     author = {Johnston, MA and Studivan, MS and Enochs, IC and Correa, A and Besemer, N and Eckert, RJ and Edwards, K and Hannum, R and Hu, X and Nuttall, M and others},
     journal = {Frontiers in Marine Science},
     volume = {10},
     pages = {100},
     year = {2023},
     publisher = {Frontiers},
     abbr = {Front. mar. sci.},
     html = {https://doi.org/10.3389/fmars.2023.1111749}
   }

2. 

   Increased dominance of heat-tolerant symbionts creates resilient coral reefs in near-term ocean warming

   AM Palacio-Castro , TB Smith , V Brandtneris , GA Snyder , and 6 more authors

   Proceedings of the National Academy of Sciences, 2023

   Bib HTML PDF

   @article{palacio2023increased,
     title = {Increased dominance of heat-tolerant symbionts creates resilient coral reefs in near-term ocean warming},
     author = {Palacio-Castro, AM and Smith, TB and Brandtneris, V and Snyder, GA and van Hooidonk, R and Mat{\'e}, JL and Manzello, D and Glynn, PW and Fong, P and Baker, AC},
     journal = {Proceedings of the National Academy of Sciences},
     volume = {120},
     number = {8},
     pages = {e2202388120},
     year = {2023},
     publisher = {National Academy of Sciences},
     abbr = {PNAS},
     html = {https://doi.org/10.1073/pnas.2202388120},
     pdf = {2023_PNAS.pdf},
   }

3. Mol. Ecol

   Antibiotics reduce Pocillopora coral-associated bacteria diversity, decrease holobiont oxygen consumption and activate immune gene expression

   Michael T Connelly , Grace Snyder , AM Palacio-Castro , PR Gillette , and 2 more authors

   Molecular Ecology, 2023

   Bib HTML PDF

   @article{connelly2023antibiotics,
     title = {Antibiotics reduce <i>Pocillopora</i> coral-associated bacteria diversity, decrease holobiont oxygen consumption and activate immune gene expression},
     author = {Connelly, Michael T and Snyder, Grace and Palacio-Castro, AM and Gillette, PR and Baker, AC and Traylor-Knowles, N},
     journal = {Molecular Ecology},
     year = {2023},
     abbr = {Mol. Ecol},
     html = {https://doi.org/10.1111/mec.17049},
     pdf = {2023_Molecular Ecology.pdf}
   }

4. 

   Comparación de tres métodos para el estudio de las comunidades bentónicas sésiles en arrecifes coralinos

   AM Palacio Castro , and FA Zapata

   In BUCEO CIENTÍFICO: Procedimientos y metodologı́as , 2023

   Bib HTML PDF Code

   @incollection{palacio2023comparacion,
     title = {Comparaci{\'o}n de tres m{\'e}todos para el estudio de las comunidades bent{\'o}nicas s{\'e}siles en arrecifes coralinos},
     author = {Palacio Castro, AM and Zapata, FA},
     booktitle = {BUCEO CIENT{\'I}FICO: Procedimientos y metodolog{\'\i}as},
     pages = {221},
     year = {2023},
     html = {https://www.accefyn.org.co/2023/Publicaciones-recientes-de-los-Academicos/Manual-de-buceo.pdf#page=221},
     pdf = {2023_ManualBuceo_Cap_18.pdf},
     code = {https://anampc.github.io/Metodos_Cobertura/}
   }

5. 

   Coral Reef Carbonate Chemistry Reveals Interannual, Seasonal, and Spatial Impacts on Ocean Acidification Off Florida

   AM Palacio-Castro , IC Enochs , N Besemer , A Boyd , and 8 more authors

   Global Biogeochemical Cycles, 2023

   Bib HTML PDF Code

   @article{palacio2023coral,
     title = {Coral Reef Carbonate Chemistry Reveals Interannual, Seasonal, and Spatial Impacts on Ocean Acidification Off Florida},
     author = {Palacio-Castro, AM and Enochs, IC and Besemer, N and Boyd, A and Jankulak, M and Kolodziej, G and Hirsh, HK and Webb, AE and Towl, E K and Kelble, C and Smith, I and others},
     journal = {Global Biogeochemical Cycles},
     volume = {37},
     number = {12},
     year = {2023},
     abbr = {GBC},
     html = {https://doi.org/10.1029/2023GB007789},
     pdf = {2023_Global Biogeochemical Cycles.pdf},
     code = {https://anampc.github.io/FLK_2021/},
   }

2022

1. 

   Microbiome signatures in Acropora cervicornis are associated with genotypic resistance to elevated nutrients and heat stress

   AM Palacio-Castro , SM Rosales , CE Dennison , and AC Baker

   Coral Reefs, 2022

   Bib HTML PDF Code

   @article{palacio2022microbiome,
     title = {Microbiome signatures in <i>Acropora cervicornis</i> are associated with genotypic resistance to elevated nutrients and heat stress},
     author = {Palacio-Castro, AM and Rosales, SM and Dennison, CE and Baker, AC},
     journal = {Coral Reefs},
     pages = {1--15},
     year = {2022},
     publisher = {Springer},
     abbr = {Coral Reefs},
     html = {https://doi.org/10.1007/s00338-022-02289-w},
     pdf = {2022_Coral Reefs.pdf},
     code = {https://github.com/anampc/Nutrients_Genotypes}
   }

2021

1. 

   Variation in susceptibility among three Caribbean coral species and their algal symbionts indicates the threatened staghorn coral, Acropora cervicornis, is particularly susceptible to elevated nutrients and heat stress

   AM Palacio-Castro , CE Dennison , SM Rosales , and AC Baker

   Coral Reefs, 2021

   Bib HTML PDF Code

   @article{palacio2021variation,
     title = {Variation in susceptibility among three Caribbean coral species and their algal symbionts indicates the threatened staghorn coral, <i>Acropora cervicornis</i>, is particularly susceptible to elevated nutrients and heat stress},
     author = {Palacio-Castro, AM and Dennison, CE and Rosales, SM and Baker, AC},
     journal = {Coral Reefs},
     volume = {40},
     number = {5},
     pages = {1601--1613},
     year = {2021},
     publisher = {Springer Nature},
     abbr = {Coral Reefs},
     html = {https://link.springer.com/article/10.1007/s00338-021-02159-x},
     pdf = {2021_Coral Reefs.pdf},
     code = {https://github.com/anampc/NutrientsHeat_Caribbean}
   }

2020

1. 

   Increased algal symbiont density reduces host immunity in a threatened Caribbean coral species, Orbicella faveolata

   LE Fuess , AM Palacio-Castro , CC Butler , AC Baker , and 1 more author

   Frontiers in Ecology and Evolution, 2020

   Bib HTML

   @article{fuess2020increased,
     title = {Increased algal symbiont density reduces host immunity in a threatened Caribbean coral species, <i>Orbicella faveolata</i>},
     author = {Fuess, LE and Palacio-Castro, AM and Butler, CC and Baker, AC and Mydlarz, LD},
     journal = {Frontiers in Ecology and Evolution},
     volume = {8},
     pages = {369},
     year = {2020},
     publisher = {Frontiers},
     abbr = {Front. ecol. evol.},
     html = {https://doi.org/10.3389/fevo.2020.572942}
   }

2. 

   Coral reef resilience to thermal stress in the Eastern Tropical Pacific

   M Romero-Torres , A Acosta , AM Palacio-Castro , EA Treml , and 3 more authors

   Glob Chang Biol, 2020

   Bib HTML PDF

   @article{romero2020coral,
     title = {Coral reef resilience to thermal stress in the Eastern Tropical Pacific},
     author = {Romero-Torres, M and Acosta, A and Palacio-Castro, AM and Treml, EA and Zapata, FA and Paz-Garc{\'\i}a, DA and Porter, JW},
     journal = {Glob Chang Biol},
     volume = {26},
     number = {7},
     pages = {3880--3890},
     year = {2020},
     abbr = {GCB},
     html = {https://doi.org/10.1111/gcb.15126},
     pdf = {2020_GCB.pdf}
   }

2019

1. 

   Abiotic controls on endosymbiotic algal communities and their implications for coral bleaching susceptibility and recovery

   Ana M Palacio-Castro

   University of Miami , 2019

   Bib HTML

   @phdthesis{palacio2019abiotic,
     title = {Abiotic controls on endosymbiotic algal communities and their implications for coral bleaching susceptibility and recovery},
     author = {Palacio-Castro, Ana M},
     year = {2019},
     school = {University of Miami},
     abbr = {UM},
     html = {https://www.proquest.com/openview/c2c679c4f958b73926b337474ab8e96e/1?pq-origsite=gscholar&cbl=18750&diss=y}
   }

2017

1. 

   Source location and food availability determine the growth response of Orbicella faveolata to climate change stressors

   EK Towle , AM Palacio-Castro , AC Baker , and C Langdon

   Regional studies in marine science, 2017

   Bib HTML PDF

   @article{towle2017source,
     title = {Source location and food availability determine the growth response of <i>Orbicella faveolata</i> to climate change stressors},
     author = {Towle, EK and Palacio-Castro, AM and Baker, AC and Langdon, C},
     journal = {Regional studies in marine science},
     volume = {10},
     pages = {107--115},
     year = {2017},
     publisher = {Elsevier},
     abbr = {Reg. Stud. Mar. Sci},
     html = {https://doi.org/10.1016/j.rsma.2017.01.007},
     pdf = {2017_Regional Studies.pdf}
   }